Loss of lysosomal membrane protein NCU-G1 in mice results in spontaneous liver fibrosis with accumulation of lipofuscin and iron in Kupffer cells

Human kidney predominant protein, NCU-G1, is a highly conserved protein with an unknown biological function. Initially described as a nuclear protein, it was later shown to be a bona fide lysosomal integral membrane protein. To gain insight into the physiological function of NCU-G1, mice with no detectable expression of this gene were created using a gene-trap strategy, and Ncu-g1gt/gt mice were successfully characterized. Lysosomal disorders are mainly caused by lack of or malfunctioning of proteins in the endosomal-lysosomal pathway. The clinical symptoms vary, but often include liver dysfunction. Persistent liver damage activates fibrogenesis and, if unremedied, eventually leads to liver fibrosis/cirrhosis and death. We demonstrate that the disruption of Ncu-g1 results in spontaneous liver fibrosis in mice as the predominant phenotype. Evidence for an increased rate of hepatic cell death, oxidative stress and active fibrogenesis were detected in Ncu-g1gt/gt liver. In addition to collagen deposition, microscopic examination of liver sections revealed accumulation of autofluorescent lipofuscin and iron in Ncu-g1gt/gt Kupffer cells. Because only a few transgenic mouse models have been identified with chronic liver injury and spontaneous liver fibrosis development, we propose that the Ncu-g1gt/gt mouse could be a valuable new tool in the development of novel treatments for the attenuation of fibrosis due to chronic liver damage.


INTRODUCTION
Human kidney predominant protein, NCU-G1, is a protein whose function is only beginning to emerge. First reported in 1994 (Eskild et al., 1994), mouse NCU-G1 was cloned in 2001 (Kawamura et al., 2001). Initial studies described NCU-G1 as a nuclear protein with gene regulatory properties (Steffensen et al., 2007), whereas more recent reports have shown that NCU-G1 is a bona fide lysosomal type I integral membrane protein (Sardiello et al., 2009;Schieweck et al., 2009;Schröder et al., 2010). NCU-G1 is highly conserved, proline-rich and ubiquitously expressed; however, it shows no sequence homology to other known proteins.
The endosomal-lysosomal pathway is sensitive to protein dysfunctions, and alterations in protein composition and function can lead to a group of metabolic diseases categorized as lysosomal disorders (Futerman and van Meer, 2004;Parkinson-Lawrence et al., 2010). Intralysosomal accumulation of unmetabolized substrates can result from malfunction of any endosomal-lysosomal protein, but the severity and clinical manifestations vary owing to secondary alterations in other biochemical and cellular pathways (Futerman and van Meer, 2004), such as apoptosis and elevated levels of reactive oxygen species due to impaired lysosomal clearance of damaged organelles through autophagy (Tardy et al., 2004;Kiselyov et al., 2007;Kurz et al., 2008;Cox and Cachón-González, 2012). Certain cell types are more sensitive to lysosomal dysfunction than others, especially cells with low proliferation capacity (Kiselyov et al., 2007;Kurz et al., 2008;Cox and Cachón-González, 2012). This is reflected in the vast frequency of neurological symptoms in different lysosomal disorders (Parkinson-Lawrence et al., 2010;Cox and Cachón-González, 2012;Platt et al., 2012). For some disorders, however, other symptoms like liver damage are also a consistent clinical finding (Platt et al., 2012).
Persistent injury to the liver eventually leads to liver fibrosis and deposition of excess connective tissue (Bataller and Brenner, 2005;Friedman, 2008;Gieling et al., 2008;Kisseleva and Brenner, 2011;Ramachandran and Iredale, 2012). The development of liver fibrosis involves several liver cell types and immune cells, including hepatocytes, hepatic stellate cells (HSCs), Kupffer cells (KCs), endothelial cells and infiltrating leukocytes (Friedman, 2008;Pinzani and Macias-Barragan, 2010;Hernandez-Gea and Friedman, 2011). Dying cells secrete reactive oxygen species, and release necrotic and apoptotic fragments, leading to activation of KCs and recruitment of inflammatory cells to the site of injury (Bataller and Brenner, 2005;Friedman, 2008). Activated KCs and recruited leukocytes contribute to the activation of HSCs into myofibroblastlike cells by secreting pro-fibrogenic cytokines, including transforming growth factor-β (TGF-β) and platelet-derived growth factor (PDGF) (Bataller and Brenner, 2005;Friedman, 2008). When activated, HSCs start secreting high amounts of extracellular matrix (ECM) proteins that differ from those normally expressed, including fibrillar collagen, thus replacing dead parenchymal cells with fibrous ECM, ultimately compromising the organ function if untreated (Gressner et al., 2007;Mormone et al., 2011).

Loss of lysosomal membrane protein NCU-G1 in mice results in spontaneous liver fibrosis with accumulation of lipofuscin and iron in Kupffer cells
Several rodent models for inducible liver fibrosis are available (Weiler-Normann et al., 2007;Starkel and Leclercq, 2011), but only a few transgenic mouse models have been identified that develop spontaneous liver fibrosis (Fickert et al., 2002;Takehara et al., 2004;Wandzioch et al., 2004;Warskulat et al., 2006). Mouse models are widely used in the study of lysosomal disorders and the impact of lysosomal protein deficiency (Parkinson-Lawrence et al., 2010;Platt et al., 2012). However, the physiological consequences of loss of NCU-G1 function have never been characterized before. The lysosomal localization suggests some alterations in the endosomallysosomal pathway following Ncu-g1 gene disruption. In this article, we present a new mouse model, created by using a gene-trap strategy to introduce a transcriptional stop codon to intron 1 of the Ncu-g1 gene (Ncu-g1 gt/gt ). Ncu-g1 gt/gt mice have no detectable expression of NCU-G1, display normal growth and fertility, and have a life expectancy up to at least 18 months. The predominant phenotype is a spontaneous development of liver fibrosis by the age of 6 months. Analyses of Ncu-g1 gt/gt liver indicate that absence of this lysosomal membrane protein leads to an increased rate of hepatic cell death, oxidative stress, activation of the fibrogenic response, and accumulation of lipofuscin and iron in KCs.

RESULTS
Successful generation of Ncu-g1 gt/gt mice Breeding of heterozygous mice carrying a gene-trap cassette inserted into intron 1 of the Ncu-g1 gene (Fig. 1A) resulted in three expected genotypes (Ncu-g1 wt/wt , Ncu-g1 wt/gt and Ncu-g1 gt/gt ) (Fig. 1B). Expression of mRNA for Ncu-g1 was analyzed to assess any transcription leakage from the gene-trap. Fig. 1C shows a total elimination of Ncu-g1 mRNA in homozygous gene-trap mice compared with wild-type mice in all organs studied. Lysosomeenriched fractions from mouse liver after tyloxapol treatment (Schieweck et al., 2009) were used to confirm the loss of NCU-G1 at the protein level as shown in Fig. 1D. Genotype and sex distributions for a total of 364 pups generated by four heterozygous breeding pairs were analyzed and found to be in accordance with Mendelian distributions (P<0.001), indicating that NCU-G1 was not essential for mouse embryonic development (data not shown). Heterozygotes and homozygotes had similar growth rates as their wild-type siblings. When mated, homozygous Ncu-g1 gt/gt mice produced litters at the same frequency and of a similar litter size as wild-type and heterozygote mating (data not shown).
Phenotype of Ncu-g1 gt/gt mice At birth, Ncu-g1 gt/gt mice were indistinguishable from wild-type siblings, and displayed no obvious behavioral differences. At the age of 6 months, lack of NCU-G1 resulted in a fibrotic appearance of the liver, with large nodules on the surface ( Fig. 2A). However, the liver:body weight ratio was unaffected ( Fig. 2A). Splenomegaly was observed in Ncu-g1 gt/gt mice with a nearly doubled spleen:body weight ratio (Fig. 2B). This is probably a result of portal vein hypertension caused by the liver fibrosis. Measurements of serum alanine aminotransferase (ALT) and aspartate aminotransferase (AST) activities showed moderate but significant increases in Ncu-g1 gt/gt mice compared with wild-type animals (Fig. 2C). Other organs (kidney, lung, heart, brain) appeared normal and were not further evaluated in this study. Interestingly, Ncu-g1 gt/gt mice were kept until the age of 18 months before termination, indicating that the liver fibrosis does not progress to a lethal condition during this period.
Inflammation and excess collagen in Ncu-g1 gt/gt liver In order to gain insight into the underlying mechanisms behind the Ncu-g1 gt/gt mouse phenotype, qPCR arrays were used to identify changes in gene expression in groups of genes known to be involved in liver fibrogenesis. This initial screening suggested that genes associated with fibrosis, hepatotoxicity and oxidative stress responses were regulated in Ncu-g1 gt/gt liver (supplementary material  Table S1). In addition, a screening of different signal transduction pathways suggested a strong upregulation of genes encoding chemokines and proteins involved in control of the cell cycle (supplementary material Table S1). A selection of these genes was verified by qPCR (see below).
Light-microscopic examination of hematoxylin and eosin (H&E)stained liver sections from Ncu-g1 gt/gt mice showed infiltration of mononuclear leukocytes and granulocytes in the portal areas with some piecemeal necrosis (Fig. 3A). Widespread deposition of collagen was revealed in sections stained with Masson-Goldner's trichrome (Fig. 3B). This observation was supported by electron microscopy, showing thick collagen fibers in the space of Disse (Fig. 3C) and sirius-red quantification of total collagen content in liver homogenates (Fig. 3D). In affected areas, loss of hepatocytes and bridging fibrosis resulted in disruption of the normal tissue architecture (Fig. 3A,C). Expression of genes such as Vcam1, Ccl2

Clinical issue
Lysosomal storage disorders are a group of inherited metabolic disorders that are caused by malfunction of the endosomal-lysosomal pathway, often with devastating consequences for patients. Most lysosomal disorders exhibit neurological symptoms, but internal organ injury and liver damage are consistent clinical findings in several lysosomal disorders. Indeed, recent research has uncovered a direct link between abnormal lysosomal function and liver fibrosis -scarring of the liver in response to chronic injury that eventually leads to liver cirrhosis. Currently, due to a shortage of more suitable models, the development of liver fibrosis is often studied in animal models that involve experimental induction of liver damage, which leads to acute fibrosis. An animal model of chronic fibrosis is needed to help improve our understanding of this condition.

Results
Transgenic mouse models of lysosomal disorders are valuable tools for characterization of the molecular mechanisms behind the broad spectrum of clinical symptoms, including liver fibrosis. In this study, the authors develop a novel mouse model with no detectable expression of the lysosomal membrane protein, NCU-G1, using a gene-trap strategy; NCU-G1 is highly expressed in liver, kidney, lung and prostate and might be crucial for normal lysosomal function. The authors report that disruption of Ncu-g1 in mice does not interfere with fertility, normal embryonic development or growth. They show that the predominant phenotype of Ncu-g1 gt/gt mice is spontaneous development of liver fibrosis, accompanied by splenomegaly. Using gene expression analyses, the authors show that Ncu-g1 gt/gt mice exhibit all the hallmarks of well-established liver fibrosis by the age of 6 months. Finally, they report that NCU-G1 deficiency leads to accumulation of lipofuscin and iron in Kupffer cells in the liver.

Implications and future directions
These results indicate that disruption of NCU-G1 function leads to chronic liver injury and activation of fibrogenesis in mice. Ncu-g1 gt/gt mice therefore represent a potential animal model for studies of these conditions and for the development of treatments for liver fibrosis. Further studies using this model will enable a more extensive characterization of the biochemical and molecular pathways that are affected during chronic liver damage and fibrogenesis, and will determine whether abnormal storage of lipofuscin and iron in Kupffer cells is a primary or secondary effect of NCU-G1 ablation. Finally, these findings suggest that disruption of Ncu-g1 might be causative for a previously undescribed lysosomal disorder that has liver fibrosis as its predominant phenotype.
Increased rate of cell death and oxidative stress in Ncu-g1 gt/gt liver In the Ncu-g1 gt/gt livers, scattered acidophilic hepatocytes were seen ( Fig. 3A, insert). Immunoreactivity for active caspase 3, a specific marker for apoptosis, showed an increased number of apoptotic cells in Ncu-g1 gt/gt mouse liver (Fig. 4A). Increased levels of active caspase 3 were also confirmed by western blot (Fig. 4B). Leukocyte infiltration and damage to hepatocytes are often associated with increased oxidative stress (Friedman, 2008), as already indicated by qPCR array analyses. Fig. 4C shows the increased levels of expression of a selection of genes associated with oxidative stress: iNos2, Gpx3, Sod3 and Noxa1.  5A). To further characterize the KCs, staining for F4/80 revealed swollen and hypertrophic macrophages ( Fig. 5B), displaying a post-phagocytic phenotype. Because inflammatory macrophages have been shown to switch to a restorative subset after phagocytosis , we investigated the expression of an inflammatory (Cd86) and a restorative (Cd81) marker  by qPCR. Fig. 5C shows a significant increase in Cd86 expression, suggesting that the activated macrophages in Ncu-g1 gt/gt livers belong to a proinflammatory subtype . Activated KCs stimulate HSC activation by secreting reactive oxygen species and pro-fibrotic cytokines, such as TNF-α (

2008). This was demonstrated by the increased expression of α-Sma,
Igfbp3 and Vim as shown in Fig. 5F and supported by immunostaining of liver sections from Ncu-g1 gt/gt mice, showing the presence of star-shaped α-Sma-positive cells in the liver parenchyma (Fig. 5G). Taken together, these results point to activation of both KCs and HSCs in Ncu-g1 gt/gt liver. When activated, these cells recruit white blood cells to sites of lesion, depicted in Fig. 3A and Fig. 4A (Maher, 2001;Bataller and Brenner, 2005;Zhan et al., 2006). The qPCR arrays suggested a massive increase in the mRNA levels for myeloperoxidase. This was confirmed at the protein level by immunofluorescence (Fig. 5H) and verified by qPCR (Fig. 5I).
Myeloperoxidase is most probably produced by the infiltrating polymorphonuclear leukocytes (Ford, 2010;Amanzada et al., 2011). This enzyme was found in a clustered distribution in small cells, and showed a low degree of colocalization with KCs, another cell type capable of producing this enzyme (Brown et al., 2001) (supplementary material Fig. S1). In support of these findings, the mRNA level of S100 calcium binding protein A8 (S100A8), a protein known to be involved in chemotaxis of polymorphonuclear leukocytes (Ryckman et al., 2003), was significantly upregulated in Ncu-g1 gt/gt liver (Fig. 5J).
Accumulation of autofluorescent material in Ncu-g1 gt/gt Kupffer cells Dysfunction of lysosomal proteins is often associated with intralysosomal storage of undigested material due to impaired hydrolytic or transport activity (Futerman and van Meer, 2004). Hence, we investigated the possibility of storage in Ncu-g1 gt/gt liver lysosomes. Fig. 6A shows immunofluorescence staining for Lamp1, a marker for lysosomes. Lamp1-positive vesicles were massively enlarged. Fluorescence examination revealed that autofluorescent material was present in these enlarged Lamp1-coated vesicles, and colocalized with CD68-positive staining, indicating activated KCs (supplementary material Fig. S2A). Storage in KCs was confirmed by electron microscopy, where large storage vacuoles were observed in this cell type in Ncu-g1 gt/gt liver (Fig. 6B). Such structures were not obviously seen in other cell types (data not shown). Affected KCs were identified based on morphology after immunoreactivity for F4/80 (supplementary material Fig. S2B). These cells were also positively stained with Perls' Prussian blue ( Fig. 6C and supplementary material Fig. S2B), indicating storage of iron in Ncu-g1 gt/gt liver KCs. Gene expression analyses showed that Ncu-g1 mRNA was expressed in isolated parenchymal as well as nonparenchymal cells from wild-type liver, ruling out the possibility that storage in KCs, but not hepatocytes, was a result of a cell-typespecific lack of Ncu-g1 expression (data not shown). In support of these findings, the mRNA levels of Hepcidin1 and L-Ferritin, proteins involved in intracellular iron accumulation (Ganz, 2011), were shown to be elevated in Ncu-g1 gt/gt liver (Fig. 6D). In addition, the expression of the iron transporter Ferroportin was increased (Fig. 6D). Next, we investigated the expression and activity of a selection of lysosomal enzymes known to be causative for lysosomal disorders. Immunofluorescence studies of cathepsin D expression showed colocalization with CD68 in liver sections from wild-type and Ncu-g1 gt/gt mice (supplementary material Fig. S3). However, the overall expression of cathepsin D was reduced in Ncu-g1 gt/gt liver (supplementary material Fig. S3). This finding was confirmed by western blot analyses where the expression of full-length cathepsin D was significantly reduced (Fig. 7A). Cathepsin D reduction has been shown during the process of tissue regeneration (Suleiman et al., 1980;Fernández et al., 2004). Chronic liver injury leads to activation of oval cells after hepatocytes have exhausted their proliferative capacity (Conigliaro et al., 2010), and might contribute to the observed increase in Mmp2 and Mmp9 expression as shown in Fig. 3G (Pham Van et al., 2008). We examined the oval cell compartment by immunofluorescence labeling for the specific marker, A6 (Engelhardt et al., 1993). Supplementary material Fig.  S4 shows strongly increased staining for A6 in Ncu-g1 gt/gt liver. Further fluorescence studies indicated that the reduced levels of cathepsin D in Ncu-g1 gt/gt liver are partially due to the increased number of oval cells, which do not express cathepsin D (Fig. 7B).

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Disease Models & Mechanisms (2014)  No alterations of other lysosomal enzymes included in this study were detected (supplementary material Fig. S5).

DISCUSSION
In this study, we have shown that Ncu-g1 gt/gt mice were viable and indistinguishable from wild-type siblings with regard to growth and fertility. However, lack of NCU-G1 expression led to spontaneous development of liver fibrosis within 6 months. The Ncu-g1 gt/gt mice showed elevated serum ALT and AST activity levels, increased deposition of extracellular collagen, activated KCs and HSCs, infiltrating leukocytes and apoptotic cells. In support of these findings, the expression of marker genes for oxidative stress and fibrosis were increased in the Ncu-g1 gt/gt liver. These phenotypic findings are all key elements in liver fibrogenesis (Bataller and Brenner, 2005;Friedman, 2008;Kisseleva and Brenner, 2008).

Furthermore, autofluorescent lipofuscin and iron accumulated in
Ncu-g1 gt/gt liver KCs. Despite ubiquitous expression of Ncu-g1 (Steffensen et al., 2007;Schieweck et al., 2009) and the verified loss of transcript in all assayed organs, this study suggested that lack of NCU-G1 predominantly affects the liver. The observed splenomegaly is likely a secondary effect due to portal vein hypertension.
Lysosomes are present in nearly every cell of the body, but pathological manifestations of lysosomal disorders can be restricted to specific organs as shown for mice with disrupted lysosomal integral membrane protein 1 (Limp1). These animals are both fertile and viable and do not present any overt phenotype, but they suffer from a disturbed water balance, and hence a kidney pathology . Limp1 is ubiquitously expressed, so the kidney pathology could be a result of an organ-specific function of Lysosomal cathepsins play a pivotal role in the execution of lysosomal cell death (reviewed in detail in Aits and Jäättelä, 2013). A direct link between hepatocyte cell death and cathepsin B and D leakage into the cytosol is well established (Roberg et al., 1999;Guicciardi et al., 2000;Kågedal et al., 2001;Canbay et al., 2003b). However, in Ncu-g1 gt/gt liver the protein levels of cathepsin B and D are not elevated, indicating that the increased level of cell death and liver fibrosis observed in Ncu-g1 gt/gt mice is not a result of an increased expression of these proteases. Decreased expression of cathepsin D has been reported for regenerating liver after partial hepatectomy, where the hepatocytes proliferate and restore liver volume within ~10 days (Suleiman et al., 1980;Fernández et al., 2004). In Ncu-g1 gt/gt liver the reduced level of cathepsin D might result from the observed lack of cathepsin D expression in oval cells. Oval cells contribute to liver regeneration when the proliferative capacity of hepatocytes is exhausted or compromised (Conigliaro et al., 2010), as often seen in conjunction with chronic liver injury (Roskams et al., 2003;Conigliaro et al., 2010), and their activation has been shown to be closely related to inflammation and cytokine production (Knight et al., 2005). Activation of the oval cell compartment, as seen in the Ncu-g1 gt/gt liver, indicates a suppressed hepatocyte proliferation at 6 months of age. The transgenic insults in the Ncu-g1 gt/gt mouse are chronic and accompanied by massive infiltration of inflammatory cells, increased apoptosis and elevated expression of cytokines, yet these mice maintain their liver:body weight ratio and sufficient liver function to avoid progression to cirrhosis and death.
Spontaneous development of liver fibrosis in combination with a similar longevity as for the Ncu-g1 gt/gt mice has been demonstrated in only a few transgenic mouse models. Among these are the Taut −/− mouse model and the hepatocyte-specific deletions of Bcl-xL or Mcl-1, all displaying elevated rates of hepatocyte apoptosis as the fibrogenic inducer (Takehara et al., 2004;Warskulat et al., 2006;Vick et al., 2009;Weber et al., 2010). Interestingly, the liver integrity in the Taut −/− mouse is maintained by oval cell proliferation (Warskulat et al., 2006). The ability of Ncu-g1 gt/gt mice to maintain sufficient liver function and integrity with older age is currently under investigation.
With regard to putatively affected pathways in which NCU-G1 might be involved, the detection of autofluorescent lipofuscin might give some clues. Intralysosomal accumulation of unmetabolized substrates is often caused by deficiencies of soluble enzymes, but some are caused by dysfunction or absence of transmembrane proteins, some of which act as exporters of metabolites through the lysosomal membrane (Futerman and van Meer, 2004). Whether NCU-G1 with its single transmembrane region (Sardiello et al., 2009;Schieweck et al., 2009;Schröder et al., 2010) might serve any export function similar to the Lamp2-mediated cholesterol export from lysosomes remains to be determined (Schneede et al., 2011). Lipofuscin is an intralysosomal polymeric material, undegradable by lysosomal enzymes. It originates from oxidative damage to macromolecules, often associated with degradation of ironcontaining proteins (Terman and Brunk, 2004). KCs contribute to the iron metabolism through phagocytosis of erythrocytes (Graham et al., 2007) and excess storage of heme in KCs has been shown to promote oxidative stress, increase hepatic inflammation, induce hepatocyte apoptosis and stimulate fibrogenesis (Otogawa et al., 2007). In support of the hypothesis that storage material in phagolysosomes of KCs can be causative for the inflammation observed in Ncu-g1 gt/gt liver, the threefold increase of CD86 expression suggests that the Ncu-g1 gt/gt hepatic macrophage subset is pro-inflammatory . However, this result needs to be interpreted with caution, because liver sinusoidal endothelial cells are also known to express this marker (Knolle et al., 1998;Knolle and Limmer, 2003). Ncu-g1 gt/gt KCs also show accumulation of iron, as detected by Perls' Prussian blue staining, coinciding with an elevated hepatic expression of the iron storage protein L-Ferritin (Recalcati et al., 2008). The plasma membrane iron exporter, Ferroportin, is expressed exclusively by KCs in liver (Knutson et al., 2003), and its expression is induced by erythrophagocytosis and iron loading (Knutson et al., 2003). During a state of inflammation, elevated Hepcidin1 levels target Ferroportin for degradation (Collins et al., 2008;Ganz, 2011). In agreement with the observed iron accumulation in KCs, the expression of Hepcidin1 and Ferroportin was increased in Ncu-g1 gt/gt liver. These results also suggest a possible accumulation of erythrocyte-derived storage material in the phagolysosomes of Ncu-g1 gt/gt KCs. An essential heme transporter from the phagolysosomes of macrophages (HRG1) has recently been described (White et al., 2013). Whether the glycosylated luminal tail of NCU-G1 might interact directly with HRG1 or offer protection against lysosomal proteases (Schieweck et al., 2009) remains to be elucidated. However, we cannot finally rule out that lipofuscin and iron deposition are rather a consequence than the cause of liver fibrosis.
In summary, we have created a viable Ncu-g1 gt/gt mouse with spontaneous liver fibrosis as the predominant phenotype. The condition progresses slowly, but displays all hallmarks of fibrosis at 6 months of age. Elevated markers for oxidative stress and inflammation were detected in Ncu-g1 gt/gt liver, in addition to increased accumulation of lipofuscin and iron in KCs. Fibrosis has many etiologies and consists of acute as well as chronic liver damage. It is well known that reversal of fibrosis is possible if the cause is remedied; however, that is often not possible. In the constant search for improved drugs to treat this condition, various animal models are essential tools. We propose that the Ncu-g1 gt/gt

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Disease Models & Mechanisms (2014) doi:10.1242/dmm.014050 (F) Presence of activated HSCs was indicated by increased expression of genes characteristic for activated HSCs (α-Sma, Igfbp3, Vim). (G) This was supported by α-Sma staining in liver sections from wild-type (WT) and Ncu-g1 gt/gt mice. Note the positive labeling of α-Sma indicating activated HSCs (arrows) in affected areas. Liver sections were counterstained with hematoxylin. Scale bar: 50 μm.
mouse could be useful in the development of treatments for attenuation of fibrosis due to chronic liver damage.

MATERIALS AND METHODS
Generation of Ncu-g1 gt/gt mice Embryonic stem cells (ES cells 129S2, P084H04) carrying a gene-trap in the first intron of the Ncu-g1 gene (RIKEN cDNA 0610031J06 gene) were purchased from The German Gene-Trap Consortium (Neuherberg, Germany). The gene-trap leads to a stop in transcription at this point. In collaboration with the Norwegian Transgenic Centre (Oslo, Norway), ES cells were injected into C57BL/6 blastocysts and chimeric mice were obtained. Five chimeric males were mated with C57BL/6 females. The first litters consisted of 29 pups out of which nine were positive for neomycin and seven of these were shown to carry the gene-trap by PCR. Two females and one male were chosen for further breeding and pups were analyzed for presence of the gene-trap by PCR, using 200 ng of ear genomic DNA and the primer pairs shown in supplementary material Table S2 to differentiate between wild-type and gene-trap-carrying mice: FlpROSA, yielding a product of 811 bp when the gene-trap cassette is present; and NCUG1, yielding a 562 bp product when the gene-trap cassette is absent. Founders were selected and mated to yield the F1 generation. Mating resulted in mice heterozygous for the Ncu-g1 gene modification. Heterozygotes were mated, leading to the birth of homozygotes. Mice were maintained in an approved animal facility (National Lab Animal Center, The Norwegian Institute of Public Health, Oslo, Norway) with access to food and water ad libitum. Animal handling was according to national laws and regulations.

Analysis of gene expression
RNA extractions from mouse liver, kidney, lung and spleen (n=3) were carried out according to the manufacturer using RNeasy Plus kit from Qiagen (Hilden, Germany). Expression of Ncu-g1 mRNA was assessed using TaqMan gene expression assays for detection of mouse Ncu-g1: Mm00658309_g1, and mouse Gapdh: Mm99999915_g1 (Life Technologies, Carlsbad, CA, USA), and LightCycler ® 480 Probes Master (Roche Applied Science, Mannheim, Germany). Signals below the threshold value (cp >40) were manually set to 40 in the calculations. RNA was extracted from livers of wild-type and Ncu-g1 gt/gt mice (n=3), and gene expression was analyzed using the Fibrosis (PAMM-120A, Qiagen), Hepatotoxicity (PAMM-093F, Qiagen), Signal Transduction Pathway Finder (PAMM-014A, Qiagen) and Oxidative Stress and Antioxidant Defense RT 2 Profiler TM Array (PAMM-065A, Qiagen), following the manufacturer's instructions. To verify array results, and to further elucidate the fibrogenic response, RNA from livers of wild-type and Ncu-g1 gt/gt mice (n=4, age 6 months) was analyzed for relative gene expression of selected mRNA transcripts by qPCR (supplementary material Table S3). Analysis was performed using LightCycler ® 480 SYBR Green I Master Mix (Roche Applied Science). Relative gene expression was calculated using β-actin and eukaryotic translation elongation factor 2 as reference genes. Isolation of mouse liver cells from wild-type mice was carried out by the two-step perfusion method as described (Hansen et al., 2002). Liver parenchymal and non-parenchymal cells were separated by differential centrifugation and Pronase E (Merck, Darmstadt, Germany) treatment as described elsewhere (Berg and Boman, 1973). The expression of Ncu-g1 was analyzed as described above.

Histochemistry
Livers from 6-month-old Ncu-g1 gt/gt (n=6) and wild-type (n=3) mice were collected and fixed in 4% formaldehyde in 0.1 M PBS. Representative tissue blocks (5 mm thick) were embedded in paraffin, sliced in 4-μm sections and stained with H&E, Masson-Goldner's trichrome staining for collagen, or Perls' Prussian blue staining for iron according to standard procedures.

RESEARCH ARTICLE
Disease Models & Mechanisms (2014) doi:10.1242/dmm.014050  2H 2 O] in distilled water for 30 minutes in the dark. Fixed tissue samples were dehydrated in a graded series of ethanol for 10 minutes each (70%, 80%, 90%, 96%), 4×15 minutes in 100% ethanol and finally 2×10 minutes in propylene oxide. Following dehydration, tissue samples were infiltrated with epoxy:propylene oxide (1:1) for 30-60 minutes on a rotary shaker, evaporated overnight, and the following day incubated 1 hour in pure epoxy before embedding in plastic capsules and polymerization at 60°C. Five tissue blocks were selected per individual mouse. Ultrathin sections were obtained using a Leica Ultracut S microtome (Leica, Wetzlar, Germany) with diamond knife. The sections were collected on copper-coated grids and stained with lead citrate for 20 seconds. All electron micrographs were obtained with a CM200 transmission microscope (Philips, Amsterdam, The Netherlands) at 80 kV and at least 20 unique micrographs were analyzed in order to produce representative figures.
Sirius-red quantification of total liver collagen Quantification of total collagen content from mouse liver tissue was carried out by a sirius-red colorimetric plate assay as described (Kliment et al., 2011). Briefly, livers were homogenized in 10 volumes of CHAPS buffer (50 mM Tris-HCl, pH 7.4, containing 150 mM NaCl, 10 mM CHAPS and protease inhibitors) using an Ultra-Turrax. The samples were diluted using PBS, dried at 37°C overnight on a microtiter plate, and total liver collagen content was determined colorimetrically using 0.1% sirius-red stain (Direct red 80, Sigma-Aldrich, St Louis, MO, USA) in saturated picric acid, and rat tail collagen (Sigma-Aldrich) as standards.

Enzyme activity assays
Enzymatic activities of lysosomal hydrolases were determined from liver homogenates (see above) using standard procedures with colorimetric substrates (p-Nitrophenyl-α-D-mannopyranoside for α-mannosidase and p-Nitrophenyl N-acetyl-β-D-glucosaminide for β-hexosaminidase). Absorption of nitrophenolate was determined at 405 nm in a 96-well plate reader. For cathepsin B determination, protease inhibitors were omitted from the lysis buffer. Cathepsin B was determined using fluorescence substrate Z-Arg-Arg-AMC (Bachem, Weil am Rhein, Germany) according to Barrett (Barrett, 1980).

Serum analysis
Coagulated blood samples from wild-type and Ncu-g1 gt/gt mice (n=4) were centrifuged at 1500 g for 20 minutes, and serum ALT and AST activities were measured at The Central Laboratory, Department of Basic Sciences and Aquatic Medicine, Norwegian School of Veterinary Science.

Statistical methods
All results are expressed as mean±s.e.m. Genotype distribution was analyzed using the Chi-square test (Microsoft Excel, Microsoft Corporation, Redmond, WA, USA). Other data were analyzed using two-tailed t-test (SigmaPlot TM , Systat Software Inc., Chicago, IL, USA).